Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791338.1_cds_XP_016506593.1_1906
CDS Infomation

[gene=LOC107824360] [db_xref=GeneID:107824360] [protein=protein TIC 56, chloroplastic-like] [protein_id=XP_016506593.1] [location=complement(join(4263..4466,4814..4976,5699..5981,6306..6503,11839..12049,12907..13380))] [gbkey=CDS]
Sequence

ATGGGGTCAATAAATTTCAACCCGTTCAATAACAACTGGTTCAACAAACCATCAACACCA
TTTCAACCGATTAATCTTTTAACCCACTTTAATTCCCTTAAACCCCAGCAACATTCCCCA
CCTTTTGCAGCCATTTCAAACCCATTTTCAAGAAAACACAAAAAAACAGCTCCAGAACAA
CCGGGTCATTACCGGAGAATGCTGGACCAGTTCTACTGGGAATGCGAAACCCGACCTGAT
TTAAGGCACGCGCCCGAAGTGGAGAAGATTCTGAACGAGGACCCAATTTTCGAGAAGAAG
GAGAACCCGACTGAAGAAGAGATTGAGGAGAATGACAAGTGGTGGGCTGAGTTTAAGGAA
AGCCCAGTGGTCCAGTTCTTGGCCCAAGCTGAAGAGATTGCGGATAAGCTTAATGAGCTT
GAGCTGAAAGAGAATTCTGCTCCTTTTAGAAGTGAAGATAAGAAATTGTGGCAGGCAGTG
CCAAATGTGATTGGATTGGATGGGAGGCCAATTCCCAGAAAAGCCATAAAGACAAAGAAG
GAATCAAATGATAAGTTTTGGGATTTTGCAAGGCAGTTCTATTTTGGGCTTTGGGGATTT
CGTCAACGACCATACCCACCTGGGAAGCCCATTGATGCTGCACAGGCTATTGGTTACAAA
AAGCTTGAAAAGCGATATTATGATTTTATTATGAGGAGCGGTGGGTGGTTTTACAAGGAT
CGATTAGGTCGTTCAAGGGGACCAATGGAATTAATACAGCTTAAGACTGCTTGGGGTGCT
GGAATCATTGATAAGCATACTTTCATTTGGGGTGAGGATATGGATGAATGGGCTCCCATT
GGAATGGTTTATGGTCTGGAAAAAGCAATTGCCACTTGGGAAGTTAGATTAGGTGCTGCT
GCTACTGCTTTCCTTCACAAACTACAGAAAGGTATACCTCCTTGGGTTCCTCTCAAAGGA
CATGAGCCGAAGACATATAAGCAGATGCAAGAAGAAGCTTATGAGAGTAAAAGGCGTGAT
TTGGCTGTTTTAGAAGCAAATGATGGTGTATGGCCTGGTGTAAGGACTCCGAGTCATGCA
TTGTTTCTTTGGGCTAGTGGCTCAGAGCTGACATCAATTTTGGAGGCTGACCACATGCCA
AACAAATACATTCCAAAGGATCTTAGGAAAGAATTGGAGAAGGTTATCCCTGGATTGAGG
CCATGGGAGGTTCTAAGTGTTGAACAAGCCATGGATCAAATAACATATGGTGGTGAATGG
TACCGCGAGCCTCTTGGTACATACACAACGGGCCCTCCTTATATTGCTGATTGGAACAAG
GATGTCATGAGATTGTTTGAGATATTCCACGACCTCAGTGTCCAAGTGTACAACAAGATG
GAGAGGACAGTTCCCGGTTTCCGTAAAGTAATGGAGAACGTCGAAATTGATTCTGCTGCT
AGAGAAACCAAAAGGGAGCAGAAGAGGGCTGCTCAGAAGAGAGCTGAGGAGGAAATTGCA
TTGTTTGGTCGAGTACGAAGTGATGATGAGTAA

Peptide Sequence

PEP ID

XP_016506593.1
PEP Infomation

PREDICTED: protein TIC 56, chloroplastic-like [Nicotiana tabacum]
Sequence

MGSINFNPFNNNWFNKPSTPFQPINLLTHFNSLKPQQHSPPFAAISNPFSRKHKKTAPEQ
PGHYRRMLDQFYWECETRPDLRHAPEVEKILNEDPIFEKKENPTEEEIEENDKWWAEFKE
SPVVQFLAQAEEIADKLNELELKENSAPFRSEDKKLWQAVPNVIGLDGRPIPRKAIKTKK
ESNDKFWDFARQFYFGLWGFRQRPYPPGKPIDAAQAIGYKKLEKRYYDFIMRSGGWFYKD
RLGRSRGPMELIQLKTAWGAGIIDKHTFIWGEDMDEWAPIGMVYGLEKAIATWEVRLGAA
ATAFLHKLQKGIPPWVPLKGHEPKTYKQMQEEAYESKRRDLAVLEANDGVWPGVRTPSHA
LFLWASGSELTSILEADHMPNKYIPKDLRKELEKVIPGLRPWEVLSVEQAMDQITYGGEW
YREPLGTYTTGPPYIADWNKDVMRLFEIFHDLSVQVYNKMERTVPGFRKVMENVEIDSAA
RETKREQKRAAQKRAEEEIALFGRVRSDDE

Transcript Sequence

Gene sequence data has not been registered.